Math 2300 Discrete Math
Project 3 Fragments

Fall 2010

Dr. Duval

These are the fragments for Project 3, on Sequencing by Hybridization:
  1. AAAA, AAAA, AAAG, AAGT, ACCT, AGCC, AGTG, AGTT, ATCA, ATGA, ATTT, CAGT, CATG, CCAT, CCCT, CCTA, CCTT, CTAC, CTTA, GAGC, GATC, GCCC, GTAT, GTTG, TAAA, TACC, TATT, TCAG, TCCA, TGAG, TGAT, TGTA, TTAA, TTCC, TTGA, TTGT, TTTC
  2. AAAT, AACG, AATT, ACAT, ACCA, ACGC, ATAA, ATAC, ATAG, ATCC, ATTG, CAAA, CATA, CATA, CATC, CCAA, CCAT, CGAC, CGCT, CGTG, CTCG, GACA, GATA, GCAT, GCGA, GCTC, GGAT, GTGG, GTGT, TAAC, TACC, TCCA, TCGT, TGCG, TGGA, TGTG, TTGC
  3. ACAT, ACCG, AGAC, AGAG, AGCG, ATCC, ATCG, CACC, CATC, CCGC, CCTA, CGCT, CGGC, CGGT, CGTG, CTAG, CTAT, CTTC, GACA, GAGA, GCGG, GCGT, GCTA, GCTT, GGCG, GGCT, GGTA, GTAT, GTGG, TAGA, TATC, TATT, TCAC, TCCT, TCGG, TGGC, TTCA
  4. AACA, AAGA, ACAG, AGAG, AGCG, AGCT, AGTA, ATTC, ATTT, CAAC, CAGT, CCTG, CGGA, CTAA, CTGC, CTGC, GAGC, GAGC, GATT, GCAA, GCGG, GCTA, GCTG, GGAG, GGAT, GTAT, GTGG, TAAG, TATT, TCCT, TGCA, TGCT, TGGA, TGTG, TTCC, TTGT, TTTT
  5. AACC, ACCT, ACTG, ATCT, ATGA, CACT, CATG, CCTT, CCTT, CGAA, CGGC, CGGC, CTCA, CTCG, CTGT, CTTC, CTTT, GAAC, GATC, GCGA, GCGG, GGCG, GGCG, GTTT, TCAC, TCAG, TCAT, TCCT, TCGG, TCTC, TGAT, TGTT, TTCA, TTCA, TTCC, TTTC, TTTC
  6. AATG, ACAA, ACCG, ACTC, AGCT, ATGA, ATGT, ATGT, ATTA, ATTA, CAAT, CCGC, CGAT, CGCT, CTCG, CTGG, CTTA, GACC, GATG, GATT, GCTG, GCTT, GGTA, GTAC, GTGA, TACA, TACT, TAGC, TATG, TCGA, TGAC, TGAT, TGGT, TGTG, TTAC, TTAG, TTAT
  7. AACG, AACT, AAGG, AATT, ACAA, ACGG, ACTA, ACTG, ATGC, ATTT, CAAG, CATG, CGGA, CGTT, CTAA, CTGG, CTTA, GAAT, GACT, GCAT, GCGT, GCTT, GGAA, GGCA, GGCG, GGGC, GTTA, TAAC, TAAC, TACA, TGCT, TGGC, TGGG, TTAA, TTAC, TTGG, TTTG
  8. AAAA, AAAG, AAAT, AACT, AAGC, AAGG, AAGG, AATA, AATC, ACTA, AGAA, AGCA, AGCC, AGGC, AGGC, ATAG, ATCA, CAAA, CAAA, CAAC, CAGA, CCAA, CCAG, CTAA, CTAA, GAAG, GCAA, GCAT, GCCA, GCCA, GCTA, GGCA, GGCT, TAAG, TAAT, TAGC, TCAA
  9. AAAG, AACA, AAGG, AAGT, AAGT, ACAA, AGAA, AGGT, AGTG, AGTG, ATTG, CAAG, CAGA, CCGG, CCTT, CGGG, GAAA, GAAC, GAAG, GCCG, GCCT, GGAA, GGCC, GGGA, GGGC, GGGG, GGTC, GTCA, GTGC, GTGG, GTGT, TCAG, TGAA, TGCC, TGGG, TGTG, TTGA
  10. AACC, AAGC, AAGT, ACCT, ACGG, ACGT, AGCA, AGCG, AGTC, CAAC, CAAG, CAAG, CACG, CCTG, CGGC, CGTA, CGTG, CTAC, CTGG, GCAA, GCAA, GCAC, GCGT, GCTA, GGCA, GGCA, GGCT, GGGC, GGGG, GTAG, GTCA, GTGG, TACG, TAGC, TCAA, TGGG, TGGT
  11. AAGA, AATT, ACCA, ACGA, AGAC, AGTC, AGTC, ATCC, ATTG, ATTG, CAAG, CAAT, CATC, CATT, CCAT, CCTA, CGAG, CTAA, CTAG, GACC, GACG, GAGT, GCAA, GCTA, GGAC, GGGA, GTCA, GTCA, TAAA, TAGT, TCAA, TCAT, TCCT, TGCA, TGGG, TTGC, TTGG
  12. AAAT, AAGT, AATC, ACCG, ACTC, AGAC, AGGG, AGTA, ATCG, CAGA, CCGC, CGAG, CGCA, CGCG, CGCG, CTAA, CTCT, GAAG, GACT, GAGG, GCAG, GCGA, GCGC, GGGT, GGTG, GGTG, GTAC, GTCG, GTGA, GTGT, TAAA, TACC, TCGC, TCGC, TCTA, TGAA, TGTC
  13. ACAC, ACAC, ACAC, ACAG, ACGT, AGCC, AGTG, ATCA, CACA, CACA, CACA, CACG, CAGC, CCCT, CCGC, CCTG, CCTT, CGCC, CGTC, CGTG, CTGT, CTTA, GAGT, GCCG, GCCT, GGAG, GTCG, GTGG, GTTA, TACA, TATC, TCAC, TCGT, TGGA, TGTT, TTAC, TTAT
  14. AATT, ACCG, AGTG, ATCC, ATTC, CAAT, CATC, CCGA, CCGC, CCGG, CGAC, CGAG, CGCT, CGGC, CGGT, CTCA, CTCC, CTGC, GACC, GAGT, GCAT, GCGG, GCTC, GCTG, GGCT, GGTT, GTGC, GTTA, TAAT, TCAA, TCCG, TCCG, TCTC, TGCA, TGCG, TTAA, TTCT,
  15. AATA, ACGG, ACTC, AGAC, AGGA, ATAC, CAAT, CGCA, CGCG, CGGC, CGGG, CGTA, CGTT, CTCG, CTCG, GACT, GCAA, GCGC, GCGG, GCGT, GCTC, GGCG, GGCT, GGGC, GGGG, GGTT, GTAG, GTTA, GTTG, TACG, TAGA, TAGG, TCGC, TCGT, TGGT, TTAG, TTGG
  16. AAGA, ACCG, ACCT, ACGT, AGAG, AGCC, AGGG, AGGT, CACC, CACC, CAGG, CCAG, CCGA, CCTG, CGAA, CGAG, CGTC, CTGT, GAAG, GACG, GAGC, GAGG, GCAC, GCCA, GGAG, GGGA, GGTG, GTCA, GTGA, GTGC, GTGT, TCAC, TCGA, TGAC, TGCA, TGTG, TGTG
  17. AAAA, AAAA, AAAC, AAAG, AAAG, AACG, AAGA, AAGA, ACAG, ACGA, ACTC, AGAG, AGAT, AGTT, ATAC, ATGA, CAGT, CGAC, CGGT, CTCG, GAAA, GAAA, GAAA, GACA, GATA, GGAA, GGGA, GGTT, GTTA, GTTG, TACT, TATG, TCGG, TGAA, TGAA, TTAT, TTGA
  18. AAAC, AACC, AACT, ACCA, ACCA, ACTA, AGCG, AGTG, ATGG, ATTG, CAAC, CACC, CATG, CCAA, CCAT, CCGT, CGAT, CGTC, CTAC, CTAG, GAGC, GATT, GCAC, GCCG, GCGA, GGAG, GGCC, GTCT, GTGG, TAAA, TACG, TAGT, TCTA, TGCA, TGGA, TGGC, TTGC
  19. AACA, AATT, ACAG, ACAT, ACCG, AGGT, AGTC, ATAC, ATTA, ATTA, CAGT, CATT, CCGT, CGTA, CTAA, CTTG, GGTC, GTAA, GTAC, GTAT, GTCT, GTCT, TAAC, TAAT, TACA, TACC, TAGG, TATA, TATT, TCTA, TCTT, TGTA, TGTA, TTAG, TTAT, TTGT, TTGT
  20. AATA, ACAA, ACCT, AGAT, AGTC, ATAT, ATCC, ATTC, ATTT, CAAT, CAGA, CAGT, CCAG, CCAG, CCGT, CCTG, CGTA, CTGG, CTGT, GATT, GGGA, GGGG, GTAC, GTAT, GTCC, TACA, TATC, TATT, TCCA, TCCA, TCCG, TCTG, TGGG, TGTA, TTCC, TTCT, TTTC
  21. AAGT, ACGA, ACGC, ACTC, AGGC, AGTT, ATGG, CCCT, CCTA, CGAC, CGAC, CGCG, CGGA, CTAG, CTCC, GAAG, GACG, GACT, GCGA, GCGG, GGAA, GGCG, GGTA, GGTA, GTAC, GTAT, GTTC, GTTG, TACG, TAGG, TATG, TCCC, TCGG, TGGT, TGGT, TTCG, TTGG
  22. AAAG, AAGC, AAGT, ACAC, ACCA, ACTC, AGCC, AGGC, AGTT, ATAA, CAAG, CACA, CACC, CACT, CATA, CCAA, CCAT, CCGT, CCTG, CGTC, CTCT, CTGC, CTTG, GAGG, GCAC, GCCA, GCCG, GCCT, GGCC, GTTG, TAAA, TCTT, TGAG, TGCA, TGCC, TTGA, TTGC
  23. AAAC, AACA, ACAG, ACCC, AGAA, AGTA, AGTC, ATGC, ATTT, CAGT, CCCG, CCGA, CCTT, CGAC, CGAG, CTGA, CTTT, GAAA, GACC, GAGA, GATT, GCTG, GTAT, GTCC, GTCG, TATG, TCCT, TCGA, TGAT, TGCT, TGTC, TTCG, TTGT, TTTC, TTTG, TTTT, TTTT
  24. AATT, ACGT, AGCC, AGCC, AGGA, ATTC, CACG, CAGC, CAGC, CCAC, CCCA, CCCT, CCGC, CCTT, CGCG, CGGA, CGGT, CGTA, CTTC, GAAT, GAGG, GCCC, GCCC, GCCG, GCGG, GGAA, GGAG, GGCC, GGTG, GTAG, GTGG, TAGC, TCAG, TCGG, TGGC, TTCA, TTCG
  25. AAGT, ACCT, AGTC, AGTG, ATCA, CACC, CCCC, CCCC, CCCC, CCCT, CCCT, CCTA, CCTC, CCTT, CTAA, CTAT, CTCG, CTGT, CTTC, GAGT, GGAG, GGGA, GTCT, GTGG, GTGT, GTTC, TAAG, TATC, TCAC, TCCC, TCCC, TCTG, TGGG, TGTG, TGTT, TTCC, TTCC
  26. AAAT, AATT, ACAA, ACCA, AGAC, AGCG, AGTA, ATGC, ATTC, CAAA, CAGC, CAGT, CCAG, CCCG, CCGA, CGAG, CGCT, CTCA, CTCT, CTGC, CTTA, GACC, GAGA, GCCC, GCGC, GCTA, GCTG, GTAC, TACA, TATG, TCAG, TCTC, TCTT, TGCC, TGCT, TTAT, TTCT
  27. AAAA, AAAC, AAAG, AACG, AACT, AAGT, ACGG, ACTG, AGAG, AGAT, AGGA, AGTA, ATCG, ATCT, ATTA, CGGA, CGTG, CTAA, CTGA, GAAA, GAAA, GAGA, GAGA, GATC, GATT, GGAA, GGAA, GTAT, GTGA, TAAC, TAGG, TATC, TCGT, TCTA, TGAC, TGAG, TTAG
  28. AACC, ACCC, ACTC, AGAA, AGAT, AGCT, ATGT, ATGT, CAGA, CAGC, CCAG, CCCT, CCTC, CTAC, CTAT, CTCA, CTCC, CTGT, GAAC, GAGA, GATG, GCTA, GCTA, GCTG, GTGA, GTGC, TACT, TATG, TCAG, TCCA, TGAG, TGCT, TGCT, TGTG, TGTG, TTGC, TTTG
  29. AAAT, AAAT, AATG, AATG, AGTC, ATAA, ATGG, ATGT, ATTA, CAGT, CATT, CGTT, GGTC, GGTG, GTAA, GTCA, GTCA, GTCG, GTGT, GTTC, GTTT, TAAA, TAAA, TATA, TCAC, TCAG, TCAT, TCGT, TGGT, TGGT, TGTA, TGTC, TGTT, TTAT, TTCA, TTGG, TTTG
  30. AAAG, AACC, AAGT, AAGT, ACCG, AGCA, AGCT, AGGC, AGTG, AGTT, AGTT, CAGG, CCGA, CCTA, CGAG, CTAA, CTAA, CTAG, GAGC, GCAG, GCCT, GCTA, GCTA, GGCC, GGCT, GTGT, GTTA, GTTA, GTTA, TAAA, TAAC, TAAG, TAGC, TAGT, TGTT, TTAA, TTAG,
  31. AACA, AATA, AATC, ACAA, ACAA, ACAG, ACCT, AGAT, ATAA, ATCG, ATGC, ATTT, CAAC, CAAT, CACA, CAGA, CATG, CCAC, CCTG, CGTG, CTGC, GATT, GCAT, GCCA, GTGT, GTTG, TAAT, TACA, TACC, TCGT, TGCA, TGCC, TGTT, TTAC, TTAC, TTGT, TTTA
  32. ACGT, AGAG, AGGG, AGGT, ATAG, ATGC, ATTT, CAGG, CCGT, CCTA, CGTA, CGTA, CTAT, GACG, GAGG, GATA, GCAG, GCCG, GCCT, GGAT, GGCA, GGGA, GGTG, GTAG, GTAT, GTGA, GTGG, TAGA, TAGG, TATG, TATT, TGAC, TGCC, TGGC, TGTG, TTGT, TTTG
  33. AGAG, AGAG, AGAG, AGAG, AGGC, AGTT, ATTC, CCCG, CCGT, CCGT, CGGT, CGTC, CGTT, CTTC, GAGA, GAGA, GAGG, GAGT, GATT, GCCG, GGCC, GGTG, GTCG, GTGA, GTTA, GTTA, TAGA, TAGA, TAGT, TCCC, TCGG, TCTT, TGAT, TTAG, TTAG, TTCC, TTCT
  34. ACCA, ACGG, AGGG, ATAT, ATGG, ATGT, CACC, CACG, CATG, CCAT, CCCG, CCGT, CGGT, CGTG, GAGG, GATA, GCAC, GCCC, GGAT, GGCA, GGCC, GGGA, GGTG, GTGA, GTGG, GTTA, TATG, TCAC, TGAG, TGGC, TGGC, TGTT, TTCA, TTTC, TTTT, TTTT, TTTT
  35. AACC, ACAA, ACCG, ACCG, ACTG, ACTT, AGGA, CAAC, CACC, CCGG, CCGT, CGGC, CGGG, CGTC, CTAC, CTCT, CTGA, CTGC, CTTC, GACA, GACT, GAGG, GCAC, GCTC, GGAC, GGAC, GGCA, GGGA, GTCT, TACT, TCGG, TCTA, TCTA, TCTG, TGAG, TGCT, TTCT
  36. AAGA, AATA, ACCT, ACGC, AGAT, AGTG, ATAA, ATAG, ATGT, CCTA, CCTT, CGCT, CTAA, CTAT, CTCT, CTGA, CTTA, GACG, GATA, GCCT, GCTC, GCTG, GGCC, GGCT, GTAC, GTGG, TAAG, TAAT, TACC, TAGA, TAGT, TATG, TCTA, TGAC, TGGC, TGTA, TTAG